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College of Humanities & Sciences

department of

Computer Science

Recent Publications by Faculty Members and Students

University of Montana student authors indicated with an asterisk

  • Brinkerhoff, D.J., Meierbachtol, T.W., Johnson, J.V., Harper, J.T. (2011) Sensitivity of the frozen-melted basal boundary to perturbations of basal traction and geothermal heat flux: Isunnguata Sermia, western Greenland, Annals of Glaciology, vol. 59 (in press).
  • Calov, R., Greve, R., Abe-Ouchi, A., Bueler, E., Huybrechts, P., Johnson, J.V., Pattyn, F., Pollard, D., Ritz, C., Saito, F., Tarasov, L. (2010) Results from the Ice- Sheet Model Intercomparison ProjectHeinrich Event INtercOmparison (ISMIP HEINO). Journal of Glaciology, vol. 56 (197) pp. 371-383.
  • Deole, R., Challacombe, J., Raiford, D. W., & Hoff, W. D. (2012). An Extremely Halophilic Proteobacterium Combines a Highly Acidic Proteome with a Low Cytoplasmic Potassium Content. J Biol Chem. 288(1):581-8
  • Heizer Jr., Esley., Raiford, Douglas. W., Raymer, Michael, Doom, Travis, Miller, Robert., & Krane, Dan. (2006). “Amino acid cost and codon usage biases in six prokaryotic genomes: A whole-genome analysis.” Mol Biol Evol, 23(9), 1670–1680.
  • Kotamarti, Rao M., Hahsler, Michael, Raiford, Douglas, McGee, Monnie, & Dunham, Margaret H. 2010a. Analyzing Taxonomic Classification Using Extensible Markov Models. Oxford Journal of Bioinformatics, July 12.
  • Raiford, Douglas W., Doom, Travis E., Krane, Dan E., & Raymer, Michael E. 2010. A genetic optimization approach for isolating translational efficiency bias. Accepted for publication in IEEE/ACM Transactions on Computational Biology and Bioinformatics, 11 February, 2010. IEEE computer Society Digital Library, IEEE Computer Society.
  • Raiford, Douglas W., Heizer Jr., Esley M., Miller, Robert V., Doom, Travis E., Raymer, Michael L., & Krane, Dan E. (2012). Metabolic and Translational Efficiency in Microbial Organisms. Journal of Molecular Evolution 74(3), 206-216.
  • Raiford, Douglas W., Heizer Jr., Esley M., Miller, Robert V., Akashi, Hiroshi, Raymer, Michael L., & Krane, Dan E. 2008b. Do amino acid biosynthetic costs constrain protein evolution in Saccharomyces cerevisiae? J. Mol. Evol., 67(6)(Dec), 621-30.
  • Raiford, Douglas W., Krane, Dan E., Doom, Travis E., Raymer, Michael L. Automated Isolation of Translational Efficiency Bias that Resists the Confounding Effect of GC(AT)-ContentIEEE/ACM Transactions on Computational Biology and Bioinformatics, 19 June 2008. IEEE Computer Society Digital Library. IEEE Computer Society, 30 June 2008.
  • Reimer, Y.J. (2012). Lost and Found: Lessons Learned from a Design Retrospective. Proceedings of the 2012 ACM annual conference extended abstracts on Human Factors in Computing Systems Extended Abstracts (CHI EA ’12), pp. 541-556. ACM Press. DOI Information: 10.1145/2212776.2212829
  • Reimer, Y.J., Cennamo, K., & Douglas, S.A. (2012). Emergent Themes in a UI Design Hybrid-Studio Course. Proceedings of the 43rd ACM technical symposium on Computer Science Education (SIGCSE ‘12), pp. 625-630. ACM Press. DOI Information: 10.1145/2157136.2157315
  • Reimer, Y.J., *Hagedal, M., *Wolf, P., & *Bahls, B. (2009). Turning the desktop inside-out: Evaluating information access and management through a single interface. Journal of the American Society for Information Science and Technology (JASIST), 62(12), pp. 2327-2346. DOI Information: 10.1002/asi.21627
  • Whigham, P. A., Dick, G., Wright, A., and Specer, H. J. 2013. Structured populations and the maintenance of sex. To be presented at EvoBIO 2013 and to appear in Lecture Notes in Computer Science 7833.

University of Montana

Department of Computer Science

University of Montana | Social Sciences Bldg. Room 401 | Missoula, MT 59812

Department Chair: Doug Raiford | (406) 243-5605 |

Office Contact: Robyn Berg | (406) 243-2883 |